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Viral Genomics Group
… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral … While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, …
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… detailed database on the denizens in the soil. While large protein databases, like UniProt, exist, are not specific … to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, Baldrian’s team …
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Alabama Agricultural & Mechanical University Internship Program
… Alabama Agricultural & Mechanical University and the Joint Genome Institute. AAMU students spent two months in Berkeley, California honing their scientific skills and collaborating with their …   Want to see past projects? Read more below         …
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The fungus that came in from the cold: dry rot’s pre-adapted ability to invade buildings
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … asexual spore, some might be in these things we called sclerotia, which are overwintering bodies. So the complexity … so, so cheap to sequence. Right now, for our particular projects, we’re not doing that right now, but we might. I …
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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   … Sequencing , Biodesign and Metabolomics .  Many users rely on a multifaceted combination of genomic, transcriptomic, proteomic, phenotypic, metabolomic, imaging, sensor, and …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae … The Secondary Metabolites Program targets the vast and underexplored reservoir of secondary metabolites produced by bacteria, fungi, algae and …
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Forest Fungi, Seagrass, and a New View of Symbiosis
… Three stories of JGI-supported research, connected to nutrient cycles. Francis Martin and Lucas Auer discuss their work on communities of forest floor fungi. Allison Joy looks into seagrass meadows' …
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Sequencing Technologies & Products
… which includes the Sequencing Technologies team, relies on collaborations with Science Programs and Operations teams to enable the JGI’s focus on expanding molecular … profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a …
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User Support
… the use of an ORCID account with two-factor authentication enabled to log in. Check our Help Site for additional … including a Login Walkthrough and FAQ . –– The JGI Project Management Office carries out a number of activities to facilitate world-class science. DOE JGI Project Managers collaborate with users to develop project …
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University of California, Merced Internship Program
… Originally conceived as a UC Merced graduate student summer research … experience at the JGI, the Genomics Internship Program soon expanded to include undergraduate students. To date, more than 90 UC Merced students have contributed to the research of numerous JGI scientists. …
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