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Plant-Microbial Interactions Group
… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in how plants … 10.1371/journal.pbio.2002860 … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos Frantzeskakis (JGI Postdoc) Interns: …
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Natural Prodcast Episode 11: Marnix Medema
Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Hey there, … up a tiny bit and just say what antiSMASH actually is and does. Marnix Medema: Yeah. So antiSMASH. We built antiSMASH … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is …
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Natural Prodcast Episode 20: Brian Bachmann
… you can always find at naturalprodcast.com or through the JGI website at jgi.doe.gov . There’s a lot more to talk about there, and I’ll … joining Vanderbilt who were doing drug discovery and neuroscience and other areas that were being very successful and …
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Frequently Asked Questions: Proposal Submission
… go to the proposal submission page , login using your JGI account (create one here if you don’t already have an … countries (Iran, North Korea, Cuba, and Syria), need DOE permission and authorization from other U.S. government … contact info is available through our Proposal Page , Science Programs pages, or please contact us with your …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… data portal I’ve been working on with my colleagues Drew Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … long, it’s definitely because we like talking about our science. So, sorry, but not really sorry. I haven’t …
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Plant Program User Advisory Committee
The Plant Program Advisory Committee is chartered to offer advice, guidance and counsel on the effective …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence … Berkeley, California.  Our location at the IGB fosters team science and collaboration with partner organizations such as …
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Metabolomics
Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an … systems, sheds light on nutrient cycling, and leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform delivers rich …
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Synthetic Biology Lab
The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology … including PacBio and Illumina.  The synthetic biology user science group: The applications group is focus on developing … the design principles for successfully engineering pathways to function in heterologous hosts, by combining …
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Natural Prodcast Episode 7: Ben Shen
Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hello, … think his energy is infectious. DAN: I’ll say up front that JGI recently started collaborating with Ben and his group to … What is beautiful for natural products is nature! Nature does this sort of – if you think of nature as a scientist, …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with the people behind the science. Hear diverse voices in science talk about their …
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Metagenome Program
… that support user analysis of biogeochemically-relevant pathways, enabling modeling of microbiomes based on … environmental viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative …
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