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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … & quality requirements for samples submitted to the DOE JGI. DNA Preparation Guidelines RNA Preparation …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural … diversity and metabolic potential, with implications for energy production, environmental sustainability, and … The Metagenome Program focuses on the high-throughput sequencing of …
Learn more
Natural Prodcast Episode 3: The Primer, Part 3
… Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey … state of things, and what we’re hoping to accomplish at JGI in this area. If this series of podcast episodes has … we recognize and sticking another piece in, that usually doesn’t work, or if it does work, it doesn’t work as well, …
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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to … increasingly collaborative and multidisciplinary nature of DOE mission science projects, this initiative aims to … free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. …
Learn more
Natural Prodcast Episode 11: Marnix Medema
… Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Hey there, … up a tiny bit and just say what antiSMASH actually is and does. Marnix Medema: Yeah. So antiSMASH. We built antiSMASH … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… data portal I’ve been working on with my colleagues Drew Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … long, it’s definitely because we like talking about our science. So, sorry, but not really sorry. I haven’t …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and … of these organisms, the program investigates the biological mechanisms that enable fungi and algae to play a vital role …
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DOE JGI Interns Share Their Summer Experiences
… This summer, the DOE JGI hosted 10 interns who came from a wide range of … DOE JGI’s efforts to promote diversity and inclusion in the sciences, among the interns were two undergraduate students …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small … with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular level. … biogeochemical processes, development of high performance plants and microbes, and understanding microbiome …
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Extreme Scale De Novo Metagenome Assembly
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Omega: an Overlap-graph de novo Assembler for Metagenomics
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Adam Reisselman on being a 2016 DOE Computational Science Graduate Fellow
… The Department of Energy's Computational Science Graduate Fellowship (DOE CSGF) program was developed to meet the Nation's growing … Adam Riesselman of Harvard University worked with DOE JGI's Sam Deutsch. Learn more about the DOE Computational …
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