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FICUS-NERSC/KBASE
… bioenergy and environmental problems.  The mission of the National Energy Research Scientific Computing Center ( NERSC … expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in … plan is written into a Statement of Work document. … For sequencing projects, once work is under way, raw sequence …
Learn more
The JGI Data Portal: Improving User Experience
The human-centered, agile collaboration between the JGI and the information technology company Truss has … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into the natural world’s … challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and …
Learn more
Natural Prodcast Episode 7: Ben Shen
… to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … started collaborating with Ben and his group to work on sequencing, synthesis and genome mining technology to help … because – mainly it’s due to the emerging technology on DNA sequencing and synthetic biology. But also the …
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Partners
The JGI leverages its existing partnerships and develops others … the services of the Arizona Genomics Institute for DNA and RNA extractions to support plant and other efforts. The JGI works closely with DOE computational facilities (e.g., the National Energy Research …
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Natural Prodcast Episode 1: The Primer, Part 1
… to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … – problems that might need special technology for DNA sequencing, genomics, metabolomics, and synthetic biology, …
Learn more
Natural Prodcast Episode 21: Elizabeth Parkinson
… … DAN: All right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. This … as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain sequences of DNA, … technology.] BETSY PARKINSON: OK. DNA affinity purification sequencing. And so the way this essentially works is you …
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Natural Prodcast Episode 16: Marcy Balunas
… in firmly in the chemistry bucket. [LAUGHS] I don’t know that that’s ever necessarily like a good description of anyone … local environments, and so they don’t transfer a lot of DNA back and forth, especially across species. And so then … really exciting work on figuring out how to get genomic sequencing data for the fungus garden because it’s more …
Learn more
Natural Prodcast Episode 6: Marc Chevrette
… to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … at the Broad that was looking to develop new methods for DNA sequencing of microbes. And what kept breaking our methods …
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Scientific Advisory Committee
Advisory Committee (SAC) is a board convened by the JGI Director to provide a scientific and technical overview … guidance, and counsel on the effective management and strategic objectives of the JGI. The SAC serves as the … include providing technical input on large-scale production sequencing, new sequencing technologies, and related …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of … Metagenome, Metabolomics, Secondary Metabolites, and DNA Synthesis Science Programs and draw from the …
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) initiative was … A Letter of Intent is required. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. …
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