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Institutional User Agreements
… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the … a version of the User Agreement between HHMI, your Host Institution and LBNL is required. NOTE:  If a PI … the Contracts Officer will send required paperwork to your institution. (Samples of the JGI User Agreement , JGI User …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a … diversity and capable of transferring genes from one host microbe to another, which can have a significant impact … the FICUS program to JEM and used resources at the DOE Joint Genome Institute (JGI) and the Environmental Molecular …
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Hot springs viruses at Yellowstone National Park have ancient origins and are adapted to thermophilic hosts
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Metabolite release by nitrifiers facilitates metabolic interactions in the ocean
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Genomics discovery of giant fungal viruses from subsurface oceanic crustal fluids
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Ecogenomics of virophages and their giant virus hosts assessed through time series metagenomics
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Mission
… expertise to support the global research community in studies of complex biological and environmental systems. … our service to the community through responsibly managing our people and resources. Our vision is to lead AI-driven genomic innovation to advance biotechnology.   …
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VPF-Class: taxonomic assignment and host prediction of uncultivated viruses based on viral protein families
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Virus diversity and activity is driven by snowmelt and host dynamics in a high-altitude watershed soil ecosystem
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JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability … GOLD is a web resource for comprehensive access to information regarding genome and metagenome sequencing …
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iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … at the end to get the compound expressed in a heterologous host strain. DAN UDWARY: Yeah, sure. That’s very similar to … even in primary metabolism or in certain snips of viruses or something. I don’t know. Then I think making sure …
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