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TbasCO: trait-based comparative ‘omics identifies ecosystem-level and niche-differentiating adaptations of an engineered microbiome
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Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis
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The mycorrhizal symbiosis: research frontiers in genomics, ecology, and agricultural application
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Environmental Genomics Group
… communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . Research Team    … labeled nutrients into biomass. When paired with metagenomics, qSIP can decipher active microbial functions in situ. … SIP (Nuccio et al. 2022) and terabase-scale metagenome combined assemblies (Hofmeyr et al. 2020) we are able to …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… trigger highlights efficiency for users requiring multiple omics methods to examine microbial chemical production. The … bacterium's entire metabolism for chemical production, the study provides a blueprint that engineers can use to design … understand how salt triggers this metabolic shift, the team combined RNA sequencing across multiple time points with …
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Feathermoss and epiphytic Nostoc cooperate differently: expanding the spectrum of plant–cyanobacteria symbiosis
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Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis
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Evolutionary history of arbuscular mycorrhizal fungi and genomic signatures of obligate symbiosis
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Natural Prodcast Episode 14: Nigel Mouncey
… And these were not in natural products, these were in studying regulatory mechanisms of, first, E. coli and then … about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, of … other capabilities, like synthetic biology , like metabolomics , like some of the more directed genomics approaches, …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Phenotypic and omics analyses of the Sordariomycetes Marquandomyces marquandii and Albophoma yamanashiensis isolated from estuarine sediments
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address climate change: … sharing.  Recently, researchers have been able to study both sides of this interaction up close, using RNA … one of the first cross-kingdom spatially-resolved transcriptomics studies to date. This paper  is the cover article for …
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