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… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new … technology in order to enhance the quality of single-cell genomes and directly link functional information with …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … Sainsbury Institute, by annotating not just one but three genomes for P. pachyrhizi , which are available on MycoCosm … … 3 P. pachyrhizi genomes on MycoCosm … Plant Datasets … Fungal Datasets …

… for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from here I can get back to a regular schedule. I’m going to kick things off today with my interview with the …

High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science … automated aspects of a commonly-used process for studying microbial communities, with results published in the  …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** … the interpretation of microbial, metagenomic, or plant genomes. [Download PDF] End-of-year Goal – Develop one new …

… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and communication. … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …

The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … Armaleo and colleagues worked with Igor Grigoriev, the Fungal & Algal Program lead at the US Department of Energy …

… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about … where I was a graduate student. Aflatoxin, of course, is a fungal natural product which is a liver toxin when humans …