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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the … as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.        … Learn more about our …
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Engineered Root Bacteria Release Plant-Available Phosphate from Phytate
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A Plant Root Atlas for Tracking Developmental Trajectories
… an atlas that maps gene expression patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells and … Phytozome and will be available for future single-cell projects.” The Berkeley Lab  Biosciences Area has been …
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Community Science Program
… sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … aims to advance genome science-based scientific research from a broad range of disciplines. Three calls fall under …
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Cataloging the Microbes that Manage the Health of River Systems
… researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds in the … and agriculture. Understanding the compositions of river microbiomes—who the core microbes are and what they do—can … anything. The collaborative consortium behind the GROWdb project demonstrates not only how researchers can …
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User Support
The JGI Project Management Office carries out a number of activities to facilitate … specific milestones, either by automated emails or emails from your Project Manager. Your Project Manager will also …
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Natural Prodcast Episode 15: Katherine Duncan
… was actually when I was traveling at the end of first year University. Quite a lot of people in Europe do this … studied chemistry, because she switched her degree program from geography to chemistry. So we were both enrolled as … of North America. So then I came back and I worked on an EU project, the Scottish Association for Marine Science. And …
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Products
Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … the product and deliverables as well as target cycle times from sample receipt to completion of standard analysis.  Raw … choice Glycerol stock of sequence verified clone depends on project DNA Synthesis Combinatorial libraries Multiple genes …
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Workforce Development & Education Outreach
… to enter the STEM workforce by fostering an understanding of our role in advancing the energy and environmental … with Biotech Partners to host students transitioning from high school to community college. … University of California, Merced … Alabama A&M University … …
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Genetic determinants of endophytism in the Arabidopsis root mycobiome
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JGI Portals
… databases and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data Portal to … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated … Genomes Online Database … Integrated Microbial Genomes and Microbiomes … Integrated Microbial Genomes — Plasmid …
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Biotech Partners
They encourage students to pursue personal, academic, and professional development experiences through in-classroom … skills and confidence in their own abilities. … Past projects …   Internship Snapshots …
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