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Carboxysomal carbonic anhydrases: Structure and role in microbial CO2 fixation
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A new-to-nature carboxylation module to improve natural and synthetic CO2 fixation
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Light-powered CO2 fixation in a chloroplast mimic with natural and synthetic parts
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… candidate bioenergy feedstock crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a … miles and eight states. In 2021, using switchgrass samples from these gardens, a team led by researchers at the … of Texas at Austin produced a high-quality reference sequence of the complex switchgrass genome. The reference …
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DOE Metrics
… = 91 days; Actual Operation = 24 days due to significant sequencer downtime related to the shelter-in-place. ††† … Hours reflect a delay in implementation of the LIMS from Q2 to Q3. As a result of the delay in the LIMS … data.   FY05-07 Sequencing Goals and Results Fiscal Year Sequence (GB) Operating Hours Targets Actual* Targets Actual …
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Gut Fungi: Unexpected Source of Novel Chemicals
Fungi from herbivore poop make surprisingly complex compounds — an … their evolutionary history, these fungi branched off early from aerobic fungi, which can breathe oxygen — just like we … finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of Energy (DOE) Joint …
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JGI@25: The Little Alga That Could
… sustainable biofuel production. The JGI published a partial sequence of Chlamydomonas reinhardtii in 2003; then in 2007 the full genome was sequenced and published in the journal Science . At the … sort of genomic hackathon to annotate a genome. (Hear more from on Chlamy from Sabeeha Merchant in this episode of …
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Microbial Genomics & Metagenomics (MGM) Workshop
… workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides access to the wealth of public microbiome sequence data and enables the user to analyze these data with existing bioinformatic methods to bridge the gap from sequence to biology. …
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User Support Analysis Group
… transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, the rows of letters … of all the other letters of the alphabet. Yet the specific sequence of these four letters represents an organism’s … The technology expresses the transcription factor proteins from a DNA template amplified directly from either genomic …
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The trajectory of microbial single-cell sequencing
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ClaMS: A Classifier for Metagenomic Sequences
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