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Katherine Louie
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species decompose debris, mobilize … that decay, and deliver those nutrients to tree roots and soil. These fungi help shape a forest’s ecology. They store … found in soil samples, and assembled those RNA transcripts into a metatranscriptome. Overall, they found that despite …
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Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation
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Transcriptional and metabolic stasis define desiccation-induced dormancy in the soil bacterium Arthrobacter sp. AZCC_0090 until water vapor initiates resuscitation
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High-quality permanent draft genome sequence of Ensifer medicae strain WSM244, a microsymbiont isolated from Medicago polymorpha growing in alkaline soil
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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Virus-Microbe Interactions of Mud Island Mangroves
… I wanted to incorporate that CSP, but also look at how viruses might be influencing the methane cycling within … post-graduate school plans. “The SCGSR gave me some great insight into my career path,” he said. “I much preferred the …
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Cataloging the Microbes that Manage the Health of River Systems
… of watershed ecosystems, where rain or snow drain into such bodies of water before heading out to bays and … oceans. While river microbes are critical to monitoring and maintaining the health of these systems, these communities … measurements collected at each sampling site, were compiled into the Genome Resolved Open Watershed database (GROWdb). …
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Products
… small genes assembled to less than 5kb in length, cloned into vector of choice Glycerol stock of sequence verified … small genes assembled totaling 5-10kb in length, cloned into vector of choice Glycerol stock of sequence verified … ) 108/161 Viral Enrichment Draft quality assembly from virus pools/plaques obtained from a single host, many …
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Natural Prodcast Episode 4: Nancy Keller
… I wanted to start, maybe just by asking you how did you get into the field of natural products?   NANCY: Yeah, that’s a … was finished with the Peace Corps, I decided I wanted to go into international agriculture. I had really changed my … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let us know! …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… in the future, the evolutionary past may hold key insights. The way that plants process nutrients has a rich … and proteins, as well as recycling nitrogen. Now, with insight into a specific enzyme class that’s important to the way …
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Introducing New Members of the JGI User Executive Committee
… Additionally, she noted, “I would also like to offer my insights in promoting diversity, equity and inclusion (DEI) … affect users and their access to technical capabilities JGI offers, as well as proposal review procedures and the …
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