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Draft genome sequence of Paenibacillus turicensis DSM 14349T from cerebrospinal fluid of a patient in Switzerland.
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An Automated Tool for Assessing Virus Data Quality
… and more virus sequences are being recovered and identified from environmental samples (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … to help researchers assess and improve the quality of metagenome-assembled viral genomes . The Impact The …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … planning workshops, as well as collecting extensive input from all JGI staff, Biosciences and Berkeley Lab leadership, … calibrate progress toward our near- and long-term goals.” View the JGI 2024-2029 Strategic Plan as a downloadable pdf.  …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference … genomic tools, allows Miscanthus to both inform and benefit from breeding programs of related candidate bioenergy … Innovation, which is supported by the U.S. Department of Energy, Office of Science, Office of Biological and …
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Cultivating Symbiotic Antarctic Microbes
… The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in environmental processes (related to interactions of soil-sediment environments, water and air-atmosphere with … interactions. Using metagenomes recovered directly from environmental samples and cultivated microbes, …
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JGI-UC Merced Interns Share Their 2021 Experiences
… During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI … embark on a career in genomics and to help foster a diverse future workforce in science. To learn more about each … Evolution of the Mitochondria Internship … Cross Species Integration of Single Cell Transcriptomes …
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Promoting the Power of Viral Metagenomics
… An article summarizing the field of viral metagenomics, authored by JGI researchers Lee … Kyrpides , was  recently published in the journal  Annual Review of Biomedical Data Science . The following guest piece … found throughout the planet’s oceans can exert great influence on earth’s carbon and nitrogen cycles. Currently …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, … calls. These documents have been shared with permission from the PIs who drafted them.  … to soil carbon storage during simulated range shifts of plant-fungal symbionts …
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Methanogenesis and Salt Tolerance Genes of a Novel Halophilic Methanosarcinaceae Metagenome-Assembled Genome from a Former Solar Saltern
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Genomic Expansion of Domain Archaea Highlights Roles for Organisms from New Phyla in Anaerobic Carbon Cycling
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Geoarchaeota: a new candidate phylum in the Archaea from high-temperature acidic iron mats in Yellowstone National Park
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Generation of Transcript Assemblies and Identification of Single Nucleotide Polymorphisms from Seven Lowland and Upland Cultivars of Switchgrass
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