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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… determination as they came onsite. From data carpentry to science communications, their schedules were filled with … skills, wet lab skills and overall connections. Theo Loureaux : I wanted to first discover new methods with tools … limited experience with, and to do so with some of the top scientists in that subfield.     Byline: Graham Rutherford …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
Congratulations to Susannah Tringe , one of eight scientists and engineers who received the 2020 Ernest … director of Berkeley Lab’s Environmental Genomics and Systems Biology Division, and JGI’s deputy for user programs. She also leads the JGI’s …
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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Marcel Huntemann
… metagenomes. He also works on automating intra-department data exchange and assists with large scale computations on R&D projects. …
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The Expanding Universe of Methane Metabolisms in Archaea
… atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta Gribaldo of the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly available metagenome …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional … A:  When a proposal is submitted to the JGI, JGI scientists will go over the whole proposal for the technical … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Community ecology across bacteria, archaea and microbial eukaryotes in the sediment and seawater of coastal Puerto Nuevo, Baja California
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université Blaise Pascal, France Ph.D. in … with long standing virus-host interactions. The ISME Journal 15, 1569–1584. Nayfach et al., 2020. CheckV assesses …
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Streamlining Regulon Identification in Bacteria
… transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … genes associated with a given transcription factor is resource-intensive and unscalable. To test the efficacy of …
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Baltic Sea coastal sediment-bound eukaryotes have increased year-round activities under predicted climate change related warming
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… and other traits when migrating back to the ocean. The Science Scientists have discovered flagella in an unexpected place: … in oceans or soils.  A recent study published in  The ISME Journal     focused on a class within  Chloroflexota called  …
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A Step Toward Controlling Soybean Rust
As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien Duplessis of the … to counter soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome … working to address some of the most pressing challenges of our time. For more information, please visit  …
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