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Viruses Reprogram Cells into Different Virocells
… infected by viruses undergo metabolic reprogramming. The Science If it looks like a duck and quacks like a duck, so … In  their study , which appeared in  The ISME Journal , they focused on how virus-infected microbes are … U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a … single step, directly into the genome. “CRAGE is central to our ability to offer host-engineering for our users,” says … select group of bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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A Community Resource for Secondary Metabolite Researchers
… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Institute (https:// ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science …
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial … in human microbiome research at the Institute for Genome Sciences at the University of Maryland School of Medicine … the Metagenome Science Program on their research are encouraged to schedule time with Emiley Eloe-Fadrosh . Click to …
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DAP-seq Drives Robust Mapping of Gene Regulation
… scale of data enabled by these approaches creates a vast resource offering researchers the ability to chart regulatory … at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … as  Arabidopsis and sorghum. Together, these datasets allow scientists to explore how gene regulation varies across cell …
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Virus Discoveries that Keep Getting Bigger
… quickly accelerated understanding of giant viruses. The Science In the last thirty years, in environments all over the world, scientists have discovered giants among viruses. Now … makeup of new giant viruses. This review highlights four of these approaches. One way of detecting giant viruses …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last …
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Effects of Polar Light Cycle on Microbial Food Web
… lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in … dominates these polar environments greatly contributes to our larger understanding of carbon and other nutrient cycles … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published …
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The More the Merrier: Making the Case for Plant Pan-genomes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … these datasets, researchers made a pan-genome containing four  B. hybridum  genomes and many  B. distachyon genomes. …
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An Addiction Crucial to a Fungus’ Reproduction
… regulate key components of its reproductive machinery The Science To better understand how beneficial organisms … effort led by researchers at Cornell University and scientists at the Joint Genome Institute, a DOE Office of … As these oil-producing fungi are potential sustainable sources of alternative fuels, so understanding …
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The fungus that made itself at home
… Serpula lacrymans adapted to a new ecological habitat. The Science By comparing genetic information from similar … environments. As reported January 5, 2018 in The ISME Journal , a team led by University of Oslo scientists and including researchers at the Joint Genome …
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