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Metabolomics
… JGI by identifying the actual molecules present in an environment that influence system behavior.  Through this identification, metabolomics enables functional genome annotation, improves understanding of the role … Find more details on the instrumentation we use and our methodology for …
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User Executive Committee
… The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their … and the annual user meeting. The UEC also acts as a liaison to the user community and the broader scientific …
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Training the Next Generation of Talent
… Office of Science user facility, Keedrian Olmstead was back on campus at the University of California, Merced to start orientation as a first-year graduate student in the Quantitative … that will take place on the UC Merced campus in late October or early November, at which time they will receive …
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Gene Expression: From On-Off Switch to Dial
… Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science … a more nuanced library approach to tuning gene expression in metabolic pathways. Compared to the traditional way, which leverages an all-or-nothing approach to … No. FA9550-14-1-0089, the Camille and Henry Dreyfus Foundation, and the JGI Synthesis Program under FP00005685. In …
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Analyze Data
… efforts to integrate data in support of new research questions that span domains. We also work with our partners to … July 22–July 24 for computing upgrades . We regret any inconvenience. …
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University of California, Merced Internship Program
… Originally conceived as a UC Merced graduate student summer research … experience at the JGI, the Genomics Internship Program soon expanded to include undergraduate students. To date, more than 90 UC Merced students have contributed to the research of numerous JGI scientists. …
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Natural Prodcast
… about natural products and the science and scientists of secondary metabolism. Natural products, secondary metabolites, and specialized metabolites all refer to … the chemicals that make species unique and different from one another. They are incredibly important to medicine, the …
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Decoding Yellowstone’s Microbial Mats
… cyanobacteria; they began oxygenating Earth over two billion years ago. A team of researchers set out to Yellowstone National Park to study how cyanobacteria are living, communally, …
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions shared their works-in-progress with 86 participants in … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Sequencing Submission Requirements for DNA Synthesis
… Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … File There are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an open source desktop application written by M. Wayne Davis or commercial options include …
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Outreach Stories
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Fishing for Novel Cellulose Degraders
… single-cell genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is … of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Using a single-cell screen, they can now identify microbes with specific functional characteristics. When they tested the screen method on …
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