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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
In a recent  Nature Genetics paper , researchers focused on the full composition of genes, or pangenome, of the model plant  Marchantia … Program . The comparative framework provided by these high quality reference genome sequences could help …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
Bacterial enzymes play second fiddle to those from fungi when it comes to breaking … nitrogen, a key ecosystem nutrient. The Impact This study is the first to dig into a forest floor ecosystem to … work was supported by the Czech Science Foundation (18- 25706S and 20-02022Y), by the Ministry of Education, Youth …
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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Tina Clarke
… joined the Lab in 2007 as the Sr. Human Resources Division Partner for the Joint BioEnergy Institute (JBEI) and in … (JGI). Tina serves in an HR advisory role to Division/Area management and supervisors to recommend solutions … on Tina knew the importance of understanding human and group behaviors as her role in HR evolved with more exposure …
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An Integrated Dataset to Understand Ecosystem Interaction
… tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. … they are, a recent data set  outlined in  Scientific Data connects molecular features to large ecosystem-level … Finally, using transcriptomics, researchers were able to study which of the trees were turned on or off in response …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the … with the assembler program MetaHipMer2. Oak Ridge National Lab is home to two supercomputers — Summit and Frontier — that process terabytes of data with MetaHipMer2. …
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A Collaboration to Improve Plant Genome Annotations Across Species
Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in … Communication Manager Sarah Sharman recently interviewed study first author Avinash Sreedasyam, a HudsonAlpha senior … plants but not the ammonium. These results highlight differences in plants’ response to nitrate …
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Yasuo Yoshikuni
… of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, … strain engineering, and biosystems design for DOE-mission-relevant discovery and applications. This program has … also manages the Synthetic Biology Pathway Engineering group. His research focus includes engineering of non-model …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … fungi, given that the intricate flagellar apparatus is highly unlikely to regain once it is lost. Depending on the … the much more extensive taxonomic and genetic sampling, our study confirmed the affinity between Olpidium and the …
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Permanent Improved High-Quality Draft Genome Sequence of Nocardia casuarinae Strain BMG51109, an Endophyte of Actinorhizal Root Nodules of Casuarina glauca
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less … sharing.  Recently, researchers have been able to study both sides of this interaction up close, using RNA … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less … sharing.  Recently, researchers have been able to study both sides of this interaction up close, using RNA … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that …
Learn more

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