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SPRUCE-ing Up Science
… in his backyard. Originally from northern California and one of the first students to participate in the DOE Joint … When Lawrence embarked on his PhD program at UC Merced in 2013, this field was just beginning to develop and expand … into the world of evolutionary biology. And around that time, a collaborative internship program between the JGI and …
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Yasuo Yoshikuni
… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of … discovery and applications. This program has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni … Nature Communications , 2023 Zhao and Yoshikuni, Discovering untapped biochemistry in microorganisms from …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… program and current PhD student, reached this milestone with a recent publication in Molecular Biology and … in this publication during her summer internship in 2018. She selected one of the projects posted by JGI fungal … in the biofuel and synthetic biology fields. In a living cell, triplets of nucleotides, or codons, dictate which …
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Tracking the Origins of Methane-Producing Microbes
… on the global carbon cycle. All methanogenic archaea use one of three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or hydrogenotrophic (most common); … these samples by sorting the microbes into small pools of cells that were then sequenced separately. From these …
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Better Genome Editing for Bioenergy
… in  Metabolic Engineering , a team of researchers likewise honed their tool before felling their research problem: at a … CRISPR-Cas9 relies on RNA with a short guiding sequence (20 bp) that directs the endonuclease where to cut, but these … sgRNAs) appeared to be rife with false negatives: that time, the team only found 359 genes to be essential. The …
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Webinar: MycoCosm Tutorial
… ) on PhycoCosm tree with several sequenced genomes. 2.  Q: How exactly EcoGroups are built? A: EcoGroups are … e.g. erg-1 (instead of the Gene ID etc., which is sometimes not easy to find out) A: If these names are assigned … team. 26.  Q: For many of these imported genomes, you mentioned they are filtered , what does/will this filtering …
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Global Diversity of the Brachypodium Species Complex as a Resource for Genome-Wide Association Studies Demonstrated for Agronomic Traits in Response to Climate
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Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus
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The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution
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Genome-Wide Sequencing of 41 Rice (Oryza sativa L.) Mutated Lines Reveals Diverse Mutations Induced by Fast-Neutron Irradiation
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Flow cytometric monitoring of bacterioplankton phenotypic diversity predicts high population‐specific feeding rates by invasive dreissenid mussels
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Substrate-restricted methanogenesis and limited volatile organic compound degradation in highly diverse and heterogeneous municipal landfill microbial communities
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