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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… for outstanding achievements in science, technology, and diversity/inclusion by the annual  HPCwire Readers’ and … community moving forward and to assemble, for the first time these large environmental  microbial data sets for JGI … enormous multi-terabyte datasets assembled for the first time with  MetaHipMer , taking advantage of scalable …
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Virus-Microbe Interactions of Mud Island Mangroves
… the opportunity to pursue part of their thesis research at one of the DOE national laboratories or national user … experience.” As he finalizes his dissertation, he noted his time with the JGI has shaped his post-graduate school plans. …
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New Tricks with Old Bones
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Evolution of a Fungal Gene Expression Regulator
… development. Summary With the aim of producing at least one reference genome for every family of fungi, the 1000 … User Facility, and others like it, are uncovering the true diversity of the fungal kingdom. The abundance of fungal …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… is not part of the standard analysis pipeline but can be done on request by the PI. We currently use the ‘Base … are on our radar, but we don’t offer these at this time. Q:  How does the correction of the extended PacBio … to address some of the most pressing challenges of our time. For more information, please visit  …
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Robert Bowers
… Bob uses single-cell genomics and metagenomics to explore how microbes … people and the environment. This includes studying the diversity, physiology and community ecology of microbes …
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Building on Experience, With a Twist?
… The first time I did this internship in the summer of 2020, it was a time where the world literally stopped. …
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JGI@25: Strengthening Soybean
… with a published complete draft genome sequence. At the time, the vital global source of both protein and oil was … rust pathogens. “All along the way, it was just like rediscovering genetics, with the evolution of sequencing … as well as the Sainsbury Institute, by annotating not just one but three genomes for P. pachyrhizi , which are …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… and environmental solutions, the JGI is well-positioned to provide users with capabilities to create … years. It also includes more than 130 implementation milestones to help track and drive progress toward the overarching … for bioproducts to support the bioeconomy. Functional diversity theme. Reading the genomes of individual organisms …
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Training the Next Generation of Talent
… weeks at the DOE JGI, Olmstead saw a few familiar faces, one of them belonged to his research adviser Axel Visel. … involving bacteria in Arabidopsis plant roots. At the same time, Lawrence worked with Nicole Johnson in Wang’s group on … transcribed instructions for building and maintaining cells through the use of deep-sequencing technologies. The …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… Form . Otherwise, email us at [email protected]. It can take time to approve requests so it is critical to contact us as … to address some of the most pressing challenges of our time. For more information, please visit  …
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Ancient Algae Reveal Secrets of Plant Evolution
… have enhanced our understanding of how early plants transitioned from water to land. Key gene groups involved in stress tolerance and multicellularity enabled plants to develop complex structures and … share key genes with land plants for making and modifying cell walls, a feature crucial for surviving on land. They …
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