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Nikos Kyrpides
… bacteriophages. Cell . 185(21):4023-4037 Nayfach S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the … Nat Microbiol . 6(7):960-970. Nayfach S, et al. (2021) CheckV assesses the quality and completeness of … Nature Biotechnol . 39(5):578-585. Nayfach S, et al. (2021) A genomic catalog of Earth’s microbiomes. Nature …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
Rumen microbes have the ability to break down hardy plant cell walls and therefore hold clues to how humans … one of the challenges of developing alternative fuels from plants is the high cost and resource requirements of …
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Informatics Advisory Committee
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Help from Citrus’ Bitter, Hardier Cousin
… orange ripens only bitter, intensely sour fruit. Yet this plant, native to China and now disseminated around the … are senior authors of the  recent study published in  The Plant Journal.  this study included the discovery of … to citrus greening disease. Trifoliate orange may be a plant of bitter fruit, yet sweet are its genetic secrets. …
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Better Genome Editing for Bioenergy
… work was supported by DOE Joint Genome Institute grant  CSP-503076 (IW, HA, and MB) and NSF  1706545 (IW). HA and JW …
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Changes to virus taxonomy and the ICTV Statutes ratified by the International Committee on Taxonomy of Viruses (2024)
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… mosses.  New research identifies sex chromosomes in the plant and illuminates the significant role sex plays in how … which is tough on the type of microbes that break down plant matter. This means plants don’t fully decompose in peatlands, and so carbon …
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Picking Up Threads of Cotton Genomics
… the cotton fields look like popcorn is literally growing on plants, with fluffy white bolls bursting out of the green … Genetics include Jane Grimwood and Jeremy Schmutz of JGI’s  Plant Program , both faculty investigators at the … of breeding into cotton,” said Schmutz, who heads JGI’s Plant Program. He and Grimwood were also part of the JGI …
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Genome sequence of the Trifolium rueppellianum - nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012
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Genome expansion by allopolyploidization in the fungal strain Coniochaeta 2T2.1 and its exceptional lignocellulolytic machinery
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
Ben Cole, a project scientist in Visel’s Genomics of Plant-Microbial Interactions Group who has mentored several … intern): Accepted a post-doctoral position with the Plant and Microbe Interaction group at Oak Ridge National … masters in nursing with an interest in the genomic basis of health, illness, disease risk, and treatment response due to …
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Fishing for Novel Cellulose Degraders
… program (LDRD) entitled ‘Tackling microbial-mediated plant carbon decomposition using “function-driven” genomics’. …
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