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Expanding Virophage Diversity
Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant …
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Who We Are
… of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the …
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I-Min (Amy) Chen
Ph.D. in Computer Science. Her research has been focused on semantic and object-oriented data modeling, and … data management infrastructure of the Integrated Microbial Genomes (IMG) family of systems. Before joining LBNL in … et al. IMG/VR v4: an expanded database of uncultured virus genomes within a framework of extensive functional, …
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Taking Stock of the Known and Unknown Microbial Space
… technologies have led to an abundance of microbial genomes becoming available to the global research … of Science User Facility located at Lawrence Berkeley National Laboratory Berkeley Lab), have taken stock of the … a deep dive into over 1.8 million bacterial and archaeal genomes to see how much of their diversity we've actually …
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Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains
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Genome Sequence of Hybrid Vibrio cholerae O1 MJ-1236, B-33, and CIRS101 and Comparative Genomics with V. cholerae▿
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The Candidate Phylum Poribacteria by Single-Cell Genomics: New Insights into Phylogeny, Cell-Compartmentation, Eukaryote-Like Repeat Proteins, and Other Genomic Features
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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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Genome Sequence of the Mesophilic Thermotogales Bacterium Mesotoga prima MesG1.Ag.4.2 Reveals the Largest Thermotogales Genome To Date
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Genome sequencing of evolved aspergilli populations reveals robust genomes, transversions in A. flavus, and sexual aberrancy in non-homologous end-joining mutants
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Virus-Microbe Interactions of Mud Island Mangroves
University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science … wetlands in south Texas,” he explained. “In terms of my project, I wanted to incorporate that CSP, but also look at …
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An Automated Tool for Assessing Virus Data Quality
Through advances in sequencing technologies and computational approaches, more and more virus sequences are being … recovered and identified from environmental samples (metagenomes). However, the quality and completeness of … and improve the quality of metagenome-assembled viral genomes . The Impact The microbes that play key roles in …
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