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David Goodstein
… and semiconductor equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to facilitate expert curation of human gene models in … responsible for genome annotation, comparative analysis and data distribution for the JGI's direct collaborators and the …
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JGI Workshop at SIMB NP Meeting
… often tedious and resource intensive. This is often due to, for example, tight regulation of biosynthetic gene clusters … that address these issues. Check the scientific program for relevant posters. …
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JGI-KBase Panel at SACNAS
Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered … establishing a professional presence through getting credit for any scientific contribution they make, whether as part … to get credit for their scientific contributions through data citations, authorship, and presenter opportunities. …
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How Maize Makes An Antibiotic Cocktail
… revealed that just a handful of enzymes are needed to transform zealexins and related precursors into a bonanza of … scientists had suspected. A team  recently reported in  Nature Plants that the zealexin pathway has an “hourglass” … the ability make zealexins, and harnessed gene expression data from these lines to identify genes associated with …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… the Community Science Program’s  Functional Genomics call for proposals .  On July 8, JGI’s DNA Synthesis Science … Genomics (formerly DNA Synthesis) call, and he noted the data had driven his lab’s focus on guide RNA library … will receive a FedEx package with the sequenced, quality controlled population representing the full library. …
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Toward More Efficient Artificial Photosynthesis
Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation … A team led by researchers at the Max Planck Institute (MPI) for Terrestrial Microbiology and the University of Bordeaux … faster than RuBisCo, the most common CO-2 fixing enzyme in nature. The library provided the Erb lab with enzymes that …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… back story — they rely on enzymes that have been evolving for billions of years. However, these enzymes are often … organisms have developed metabolisms that function with a toolkit of enzymes. It’s useful to differentiate these … separately for billions of years have some common signatures of muli-substrate specificity. However, different …
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Training the Next Generation of Talent
Olmstead was back on campus at the University of California, Merced to start orientation as a first-year graduate … genome research and apply experimental and computation tools to solve research problems. In Visel’s group, Olmstead … says. “Many academic labs don’t know how to analyze RNA-Seq data very well, sending it out to companies. I’ll take that …
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Disclaimer
NOTICE Information from this server resides on a computer system … the United States Government nor the University of California nor any of their employees, makes any warranty, … including the warranties of merchantability and fitness for a particular purpose, or assumes any legal liability or …
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Enlarging Windows into Understanding Gene Functions
… array of combinations, are unremarkable, save perhaps for the absence of all the other letters of the alphabet. … Berkeley National Laboratory (Berkeley Lab). And one of the tools that researchers can apply to study the transcription … (cDNA), reducing the amount of time it takes to produce a dataset from months to days and halving the total reagent …
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Fishing for Novel Cellulose Degraders
The Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. Designed with feathers … cellulose-degrading microbes. The new technique is another tool for microbial ecologists to learn more about the … researchers also hooked and were able to reconstruct a high-quality draft co-assembled genome for a new genus level …
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Streamlining Regulon Identification in Bacteria
… regulation is critical to ensuring genes vital for growth and survival across various environments are expressed when their functions are needed. Data yielded through RIViT-seq expand the known … target genes in 11 of those. That work published in Nature Communications on June 17 , 2022, was conducted by …
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