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… The Impact Traditional methods for breaking down biomass use aerobic methods (those using oxygen) to remove lignin and transform the remaining … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential …

… time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more clearly. … comprised of two (or more) participants. One is a fungus (usually belonging to the ascomycetes, one of the two … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and …

… This webinar focused on how the JGI employs single-molecule, long-read DNA sequences to aid … which yields ~ 180 Gb of data per library. Q: How much DNA/coverage is required for DNA modification detection? A:  DNA … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …

… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal … discovered more than 6,000 mitochondrial sequences previously unrecognized within existing public databases and … twice the size of the largest fungal mitochondrial genome reported before this study. A statistical comparison of …

… genomics can add significant value to the other commonly used culture-independent sequencing approaches including … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … sampled hot spring, a dataset of nearly 500 single cells covered the diversity of most taxa within the sample. …

… lineages. The Science From the distinct smell of eucalyptus to the flavor of wine, terpenes are ubiquitous. A diverse … proposal by the DOE’s Joint BioEnergy Institute (JBEI), the JGI worked on resequencing several eucalypt genomes to … genome organization between the two species. The work was reported in the journal Heredity . In order to understand …

… Over the years, hundreds of interns have come to the JGI from all parts of the globe to gain lab experience and … they’ve all mentioned how invaluable their time at the JGI was and how great it was to have an experienced career …

…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do anything, they must find a host, and not just any host will do. It must be a … (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the …

… first time, a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial … characterize viral-host interactions. The team discovered that the mat’s viruses specialize to single hosts, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… migrating back to the ocean. The Science Scientists have discovered flagella in an unexpected place: hot spring-dwelling … microorganisms for biofuel production and other sustainable applications. Summary Hot springs are … A recent study published in  The ISME Journal     focused on a class within  Chloroflexota called  …

… vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. These vents are too … extreme conditions. They identified 511 new or recently discovered genera of bacteria and archaea. Many of the samples … the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …

… to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the …