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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of … species — dwarfing the diversity of plants. To put this evolutionary timescale in perspective, the genus Aspergillus … Berkeley National Laboratory (Berkeley Lab). “These data can also be used for machine learning and artificial …
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The fungus that made itself at home
… Retracing how the dry rot Serpula lacrymans adapted to a new ecological habitat. The Science … than its partner brown rots. The team’s results reflect the evolutionary gains and losses of S. lacrymans var. lacrymans … This research was supported by the University of Oslo and Norwegian …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The Science … drought, from a large-scale field experiment to uncover the mechanisms behind sorghum’s capacity to produce high yields … University of California (UC), Berkeley, UC Agriculture and Natural Resources (ANR), US Department of Agriculture …
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Pan genome of the phytoplankton Emiliania underpins its global distribution
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Tanja Woyke Elected to American Academy of Microbiology
… Congratulations to the JGI’s Tanja Woyke , who has been elected to the American Academy of Microbiology (AAM) ! She is among the 68 new … Woyke is also one of the organizers for the upcoming Viral EcoGenomics & Applications (VEGA) Symposium which is …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … Facility, found that the fungus Olpidium is a link in the evolution and transition of fungi from aquatic to … of British Columbia and Dr. Rochon from Agri-Food Canada at Summerland BC aimed to generate whole genome data …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month … that goal will mean slashing direct emissions from energy, natural gas and electricity, as well as embodied emissions. … new initiatives like this. “So when we have a new idea, we can come to them and say, ‘you know, we want to try this. We …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… In April 2020, we mark both the 50th celebration of Earth Day … plays an essential role. But other plants, which do CAM, can kind of clam up during the day, and open their stomata … to. So, it allows us to be able to tease apart some of the mechanisms that regulate that response to drought through …
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly actinomycetes. His … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University of Tokyo PhD, … Kunakom S, Otani H, Udwary DW, Doering DT, Mouncey NJ. …
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Dynamics and activity of an ammonia-oxidizing archaea bloom in South San Francisco Bay
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T-Toxin Virulence Genes: Unconnected Dots in a Sea of Repeats
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon … hold much of the Earth’s carbon as well as material that can be converted to energy, are made up heavily of sphagnum … sex chromosomes in the plant and illuminates the significant role sex plays in how the moss grows, stores carbon and …
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