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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected … (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of … how soil ecosystems function. He was one of the eight JGI researchers on the 2023 Highly Cited Researchers list, …
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The ectomycorrhizal fungus Paxillus involutus converts organic matter in plant litter using a trimmed brown‐rot mechanism involving Fenton chemistry
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Calculating the Costs of Multiple Switchgrass Gene Copies
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered that the candidate bioenergy …
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Quantitative trait loci for cell wall composition traits measured using near-infrared spectroscopy in the model C4 perennial grass Panicum hallii
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Examining the Relationship Between the Testate Amoeba Hyalosphenia papilio (Arcellinida, Amoebozoa) and its Associated Intracellular Microalgae Using Molecular and Microscopic Methods
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Shared Genomic Regions Between Derivatives of a Large Segregating Population of Maize Identified Using Bulked Segregant Analysis Sequencing and Traditional Linkage Analysis
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Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
… of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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An Automated Tool for Assessing Virus Data Quality
… uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Foundation (FAPESP). A.P.C. received a scholarship #2018/04240-0 from FAPESP. … CheckV on IMG/M Data portal … …
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Daniel Udwary
Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites group. His research interests … gene clusters in bacteria and fungi. Prior to joining the JGI, he spent time as a faculty member at the University of … HPC consultant with NERSC. Dr. Udwary co-hosts JGI’s "Natural Prodcast" podcast, a "fireside chat"-style …
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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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Kanwar Singh
Kanwar spends part of his time assisting JGI users by processing their single cell samples using our …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
Hear more about what they learned from working with their JGI mentors, what challenges they overcame, and what new … school.  The interns from this cohort and their respective JGI mentors are: Ruoxi Zhao and mentor Margot Bezrutczyk … Yumary Vasquez : So this summer what I learned at the JGI is how to really work in the government lab. And I find …
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