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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
Understanding (MoU) signed between UDE and Berkeley Lab in 2022, the delegation from UDE familiarized themselves with … partners at the University of Duisburg-Essen in Germany in 2024 and 2025.  Participants from the UDE were Alexander …
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DOE JGI Interns Share Their Summer Experiences
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
In April 2020, we mark both the 50th celebration of Earth Day on April … need to survive, that humanity needs? And some of these discoveries might actually, I mean, they literally may be the …
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An Automated Tool for Assessing Virus Data Quality
… approaches, more and more virus sequences are being recovered and identified from environmental samples … However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a previous effort, … of the U.S. Department of Energy under contract no. DE-AC02-05CH11231. This work was also supported the grant …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” delving into the most recent expansions of the Tree of Life and latest discoveries toward the evolution of cellular complexity and …
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Boosting Small Molecule Production in Super “Soup”
… to keep processes running smoothly. As reported August 26, 2021, in Nature Communications , researchers led by Hal … Genomics of Energy & Environment Meeting on September 1, 2021. Register here to hear him and others.   Byline: Massie …
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Introducing New Members of the JGI User Executive Committee
… studies ecological and evolutionary factors shaping the assembly of fungal endophytes across land plants and lichens, … and can serve no more than two consecutive terms. In late 2021, the JGI launched a solicitation for nominations for …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… these gaps of knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( … nearly 5,000 publicly available ones and 1,100 metagenome-assembled genomes (MAGs) reconstructed from sequenced … – and could have applications in many fields. The team discovered that rampant horizontal gene transfer and frequent …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… a colored-in page of that book. Published online September 28, 2022, in Cell , a team led by researchers at Tel Aviv … NCBI and one of the senior authors on the paper, of the uncovered viral diversity. “Although the technical challenges …
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Enlarging Windows into Understanding Gene Functions
Technologies Group. In an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first … DAP-seq and multiDAP allows for ultra high throughput discovery of transcription factor binding sites across many …
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Fishing for Novel Cellulose Degraders
… a microbial community from geothermal hot springs, they uncovered a novel cellulose-degrading bacterium typically … and were able to reconstruct a high-quality draft co-assembled genome for a new genus level member of the novel … Science User Facility, is supported under Contract No. DE-AC02-05CH11231. The work was supported by a JGI Director’s …
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Learning to Look
Waldo will have all of these features. As described July 22, 2019, in  Nature Microbiology , a team led by scientists … of viruses, with six families. Additionally, the team uncovered a range of genetic diversity among inoviruses with … to predict the presence of anti-CRISPRs, recently discovered inhibitors of bacterial CRISPR-Cas systems that have …
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