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Morphogenesis, starvation, and light responses in a mushroom-forming fungus revealed by long-read sequencing and extensive expression profiling
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Biosensor-driven strain engineering reveals key cellular processes for maximizing isoprenol production in Pseudomonas putida
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Multi‐Omics Analyses Reveal Divergent Molecular Mechanisms Underlying Plant Biomass Conversion by Five Fungi
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UC Merced Interns Reflect on Their JGI Summer Projects
… JGI scientists on research projects that contribute to the larger mission of the U.S. Department of Energy. Students … skills as well as build their network in the field of genomics and scientific research. The topics students worked … the goal of inspiring students to embark on a career in genomics, and to help foster a diverse future workforce in …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His … of community-building efforts in the field of viral ecogenomics. For this role, Dr. Roux can rely on more than 10 … years of expertise in the fields of virus ecology and virus genomics, where he has engaged in collaborative, …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome Institute, a DOE Office of Science User Facility, revealed the largest number of TPS genes of any currently sequenced … desirable from a biofuels production perspective. By using genomic database alignment tools, researchers searched for …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… embraced the research question and applied it to such a large data set, but also went all the way through to convert … to learning about how to navigate and analyze large genomic datasets during the internship, Wint also began … Analysis of Fungal Protein-Coding and tRNA Genes Reveals Conserved Patterns of Adaptive Evolution . Mol Biol …
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The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal tar‐contaminated sediment, reveals physiological and metabolic versatility and evolution through extensive horizontal gene transfer
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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JGI@25: From Life at the Extremes to Editing Genomes
… led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection of publicly accessible metagenomic datasets from a wide variety of ecosystems around … here .) Working with the JGI, Banfield is a pioneer in metagenomic studies, recovering microbial genomes from biofilm …
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An Integrated Dataset to Understand Ecosystem Interaction
… outlined in  Scientific Data connects molecular features to large ecosystem-level processes for the first time. By … managed through human intervention. By leveraging metagenomics, scientists were able to analyze the DNA of … by the trees and associated microbial communities. This revealed key metabolic pathways and metabolites associated …
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Natural Prodcast Episode 15: Katherine Duncan
… that’s just incredible to think about. And then, from an genomic point of view, I mean, I don’t need to say to you, … have a couple of projects in the lab that also work in microalgae as well. So it’s not just actinobacteria that we work … adaptable to other organisms. And we’ve done that with microalgae. They’re pretty cool as well. A lot of them have …
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