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A Chromosome-Scale Genome Assembly of the Flax Rust Fungus Reveals the Two Unusually Large Effector Proteins, AvrM3 and AvrN.
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Brachypodium distachyon genotypes vary in resistance to Rhizoctonia solani AG8
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Training the Next Generation of Talent
… DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy … is QSB assistant professor Suzanne Sindi . “There is a large interest at UC Merced to establish connections to the … were directly assigned to the two of us just to get the structure set up and collect the first round of feedback …
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Boosting Small Molecule Production in Super “Soup”
… Yeast strains engineered for the biochemical conversion of glucose to value-added products are limited in chemical … to keep processes running smoothly. As  reported August 26, 2021, in  Nature Communications , researchers led by Hal … with engineered yeast cells but then moves out of the cell structure into a cell-free system. The work complements …
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Four Researchers Join JGI User Executive Committee
… have been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user … missions. The JGI provides advanced genomic capabilities, large-scale AI-ready data and expertise to the global … research focuses on the evolution, ecology, genomics and function of microbes and microbiomes, especially those found …
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Gut Fungi: Unexpected Source of Novel Chemicals
… The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … analyses) to break up the compounds and to puzzle out their structures. Their results indicate that anaerobic fungi … the compounds. Although what compounds they make is still largely a mystery, anaerobic fungi clearly have unexpected …
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Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The … paper that describes sorghum’s response to drought, from a large-scale field experiment to uncover the mechanisms behind … and some differently. Some different responses relate to functioning of the photosynthetic machinery, which requires …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the … with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this … these polar environments greatly contributes to our larger understanding of carbon and other nutrient cycles on a …
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JGI-KBase Panel at SACNAS
… Nov. 2: Getting Credit for Scientific Contributions of Any Size … students (and their mentors) how to begin establishing a professional presence through getting credit for any …
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Cultivating Symbiotic Antarctic Microbes
… The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in … including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial communities that … to that of a free-living organism. First discovered in 2011, Nanohaloarchaea are part of the DPANN (Diapherotrites, …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …
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