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When “The Blob” Made It Hotter Under the Water
… event may foreshadow climate change impact on marine microbial communities. The Science A team of researchers tracked the impact of a large-scale heatwave … Blob.” The event was recorded during a long-term study of microbial communities in the northeastern subarctic Pacific …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
Congratulations to Susannah Tringe , one of eight scientists and engineers who received the 2020 … was recognized for “advances in sequence-based studies of microbial assemblies, revealing the roles of microbial communities in carbon cycling, in interactions …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … The first step in the deadly dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” … on its tail fibers to latch onto a specific target on the microbial cell’s membrane. Two decades ago, a team …
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Krishna Palaniappan
Krishna is responsible for the design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and …
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The Power of One, Amplified
A preview of how large-scale single cell genomics complements … of bioinformatics tools for  extracting snippets of microbial genomes directly from environmental sequence data, … ago, a candidate bacterial lineage was identified from microbial and metagenome sequence data sets generated from a …
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New Research Sheds Light on Diversity in the Deep Sea
Microbial communities living near hydrothermal deep-sea … get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … these vents, and underwater volcanoes,  researchers studied microbial communities across five oceanic regions. In doing …
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Tomas Tyml
… and genomics to study endosymbiotic associations within microbial eukaryotes. He hopes to broaden our understanding of the roles these associations play in the evolutionary history of life. …
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Marcel Huntemann
Marcel is in charge of several production pipelines (gene calling, functional annotation and methylomics) that run on microbial genomes and metagenomes. He also works on …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth Promoting Rhizobacterium Graduate Interns … Morgan Lavenstein Bendall and mentor Juan C. Villada, Ecology & Evolution of Self-Catalytic Introns across Earth’s …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across … University campuses for biotechnology education as part of a course-based undergraduate resource experience. Hear from CSU San Marcos Professor Matt Escobar and UC Davis Associate Professor …
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JGI at the AGU Fall Meeting
Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … on Intensive Agricultural Lands Changes Nitrogen Cycling Microbial Communities and Reduces N2O Production Potential … A finely tuned, time-resolved analysis of viral and microbial communities in the Erpe river” 8:30am Convention …
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Supercharging SIP in the Fungal Hyphosphere
The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, with results published in the  … things like biomass and  biofuels . However, AMF and the microbial communities they inhabit are notoriously difficult …
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