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… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach to better understand … at protein function within them. The work was led by a team of scientists at the U.S. Department of Energy (DOE) Joint …

… and enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer … rumen metagenome projects. Standing at the intersection between the rapid development of genome and computational … metagenome binning software … Education … Selected Publications … Software …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … was published online June 8, 2014 in the journal Nature Genetics . “Common beans are a major societal crop for those …

For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … is a superorganism: one being that is actually comprised of two (or more) participants. One is a fungus (usually … gene swaps via horizontal gene transfer would have occurred between the partners. Yet the team found none. Instead, the …

A preview of how large-scale single cell genomics complements … studies. The Science Researchers demonstrated the value of conducting large-scale single cell genomics by collecting … species recombination, indicating variation in gene flow between the analyzed community members. The Impact Though …

… insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … into multiple interconnected layers. The architecture of these algorithms, inspired by communication networks … learning. Vector representations allow homology searches between proteins to become much simpler; instead of aligning …

… 2023 Symposium” delving into the most recent expansions of the Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial symbiosis. Further, the …