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Draft genome sequence of Nitrobacter vulgaris DSM 10236T
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Hi-C metagenome sequencing reveals soil phage–host interactions
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Draft genome sequence of Gleimia europaea DSM 26657
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Interns contributed to a number of projects, from refining lab protocols at the … Hour mentioned that she had gained knowledge in bioinformatics and machine learning. “Also,” she added, ”I’ve … Brandon Barana Mentor: Zhong Wang Project:  Embeddings Based Clustering of Biosynthetic Gene Cluster for Novel …
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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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Learning to Look
… Machine learning approach significantly expands inovirus … answer the question, “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters … Roux. “The machine learning approach allows you to quickly scale up once you’ve found the right features that you can …
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High-quality PacBio draft genome sequences of 17 free-living Bradyrhizobium and four related Nitrobacteraceae strains isolated from arid soils in the Santa Catalina Mountains of Southern Arizona
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … Congratulations to Jennifer Doudna of the University of California (UC), Berkeley and Lawrence Berkeley National … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day … relevant to living on a changing planet. Transcript for Audio Two special days occur in April: the 50th … stressors, um, alter microbial biomass and then what the consequences are for the ecosystem. ALISON:  So, Ed is trying …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  … Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct … genes. This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… A special issue of Synthetic Biology celebrates research … more than 10 papers, including two Nature Plants publications, in five years, have come out of the … A third story from the issue — Machine learning-based prediction of activity and substrate specificity for …
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Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing
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