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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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Work With the JGI! Tips for a Winning CSP Proposal
… The JGI’s Community Science Program gives researchers access to all kinds of sequencing, ‘omics and bioinformatics capabilities — and it’s open to scientists at any … and the environment several times a year. A few proposal calls have deadlines coming up – in January, March, and …
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JGI at the AGU Fall Meeting
… This year the AGU Fall Meeting, with the theme “Science is … hosts sessions in New Orleans and online. Register for the meeting here. Here are some sessions of interest … Learn About Available Expertise and Resources, Open-Call Opportunities, and Important Tips for Submitting …
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Ancient Algae Reveal Secrets of Plant Evolution
… Research uncovers the genetic foundations that helped plants … 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , … of how plants adapted to terrestrial life paves the way for innovations in sustainable agriculture and clean energy. …
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and … advancement holds the potential to expand opportunities for bioenergy and bioengineering applications. “We worked … it in fungi, plants, bacteria and archaea. It works on basically anything we’ve tried.”  DAP-seq Revelations Provide …
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Richard Fox
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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons … the program . “There was a lot of freedom to explore,” he recalled. His project involved developing an algorithm and … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  … . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct … We acknowledge the use of deletion strains generated by Grant P01 GM-068087 …
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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Graduate Students Get Thesis Research Opportunity at the JGI
… Twice a year, the DOE Office of Science Graduate Student Research … or national user facilities. As a result of the latest call , a total of 70 graduate students from 52 universities … to answer our most pressing problems. I’m very much looking forward to working with JGI and LBNL scientists and have …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing … to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently … The project was funded by the U.S. Department of Energy Joint Genome …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive … again how did you pick genomes to be on the genomes portal? For the taxa I work on, there are 7 genomes on NCBI but your … by Sara 4.  Q(uestion): Are all CSP produced data automatically assembled and run through your annotation pipeline …
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