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Plotting a Model for Virus-Host Warfare Deep Below Ground
… viral genome found in the deep subsurface ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets … releasing fresh organic carbon which can serve as a food source for other microbes into the environment. Summary In J. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a … single step, directly into the genome. “CRAGE is central to our ability to offer host-engineering for our users,” says … select group of bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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Green Algae Reveal One mRNA Encodes Many Proteins
… reported in the Proceedings of the National Academy of Sciences , a team of researchers has found numerous examples … zofingiensis . “I was scrutinizing the genes of one of our species of algae and kept seeing what looked like … and first author of the article. The research team included scientists at the University of California (UC), Berkeley, …
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Fungal Friends or Foes in Plant Roots
… and fungi that can help or harm plant host health. The Science Researchers compared the genomes of fungi that … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … isolates from the collection. The team then compared this dataset against nearly 80 previously published fungal …
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Ancient Algae Reveal Secrets of Plant Evolution
… helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , scientists have enhanced our understanding of how early plants transitioned from … This work was funded by the US National Science Foundation (NSF) CAREER award (DBI-1652164, …
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Fungus Fuels Tree Growth
… growth of poplar, a potential biofuel feedstock.     The Science The fungus  Mortierella elongata enjoys a dual … effort to understand its influence on the plant, a team of scientists studied what happens to the tree’s physical … as secreted proteins. However,  M. elongata  seems to encourage the plant to have leakier cell walls and weaker …
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Large Direct Repeats Flank Genomic Rearrangements between a New Clinical Isolate of Francisella tularensis subsp. tularensis A1 and Schu S4
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Supporting Global Research into Actinomycetes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, as well as a member of  its Secondary … Prodcast podcast , where she talks about this community resource. ) “Most people study actinomycetes because they … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … his team then linked those species-level observations with data on microalgal communities across different ocean … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Shotgun metagenome data of a defined mock community using Oxford Nanopore, PacBio and Illumina technologies
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Model Choice, Missing Data, and Taxon Sampling Impact Phylogenomic Inference of Deep Basidiomycota Relationships.
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Structure determination of the HgcAB complex using metagenome sequence data: insights into microbial mercury methylation
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