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… Applications group to operate a similar single-cell genomics pipeline that provides JGI users access to the … His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional … unicellular marine predators.  PNAS 116 (41), 20574-20583 Couradeau, J.S. et al. 2019. Probing the active fraction of …

… UEC. As a user of the JGI and the Environmental Molecular Sciences Laboratory, another DOE user facility, she will … laboratory researchers. This will help the JGI shape its programs, capabilities, and resources to best meet the broad base of user community needs. …

… for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers … biofuel production. Efforts such as the 1000 Fungal Genomics Project led by the DOE Joint Genome Institute … of Lawrence Berkeley National Laboratory, aim to improve our understanding of fungal diversity by sequencing genomes …

… accepted proposals.  The New Investigator call , part of our  Community Science Program , allows us to work and share our tools with … and genome assembly to investigate microbial and plant metabolism across diverse ecosystems — from Antarctic …

… helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a … most widespread type of mycorrhizal fungi, live within a plant’s root system. They form mutually beneficial … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National …

… broadens understanding of Antarctic biogeography. The Science Haloarchaea flourish in hypersaline environments, and researchers are … metagenome data generated from samples collected at four Rauer lakes to assess population level genomic … Research Council (DP150100244) and the Australian Antarctic Science program (project 4031). The work conducted by the US …

… biological and environmental samples in support of user science.  Capabilities offered by the platform are a result … Discovery. 2020.  Reference Module in Chemistry, Molecular Sciences and Chemical Engineering.  DOI: … Transitions in the Green Alga Chromochloris zofingiensis. Plant Cell. 2019;31: 579–601. 5. Erbilgin O, Rübel O, Louie …

… Genomics and Systems Biology Division of the Lab’s Biosciences Area since 2018. Woyke also holds appointments as … honor,” said Axel Visel , JGI Deputy for Science Programs. “It clearly speaks to the enormous impact her … Woyke’s caliber support the JGI User community in accessing our resources and help them to push the boundaries of energy …

… – that’s managed to have a big impact. UC Berkeley plant biologist Sabeeha Merchant explains why she works on … Merchant is also a faculty scientist in the Environmental Genomics & Systems Biology Division of the Berkeley Lab Biosciences Area.] …

… Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is … around the world, the JGI Genome Portal is a critical resource — it provides access to all of JGI’s genomic databases … more findable and easier to download is a complex one, so our joint team started small, in the tradition of agile …

… A tall native plant of the North American prairie, switchgrass ( Panicum … of scientists made an ambitious plan to begin to link the plant’s varying traits — height, biomass, hardiness to cold, …

… the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the …