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… Uncovering associations between plant roots and fungi that can help or harm … Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other … of the key community participants and enabling future metagenomics studies.   …

… (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of … CSP and the JGI-EMSL FICUS programs and brings expertise in metagenomics and novel applications for long-read DNA …

… in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received … developed novel tools for large-scale in situ gene expression analysis in multicellular organisms. During his …

… In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would …

… The Environmental Molecular Sciences Laboratory (EMSL) and the Joint … of tools that leverage stable isotopes to measure carbon and nutrient flux, and identify microbes assimilating … 1. Q(uestion): How much DNA is required for the JGI SIP metagenomics pipeline? A(nswer):  The more the better. We …

… zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells and combining the information with previously published datasets. The work was  … by neighboring cells in these processes.   One of the study’s co-authors is  Benjamin Cole , a research scientist …

… Through advances in sequencing technologies and computational approaches, more and more virus sequences are being recovered and identified from environmental samples (metagenomes). However, the quality and … The work was led by research scientist Stephen Nayfach, the study’s first author in the Microbiome Data Science group …

… hermaphrodites, expressing both male and female gametes in one individual. But some, including shrub willow  Salix purpurea , employ the evolutionary strategy we are far more familiar with: … plant biologist at West Virginia University (WVU), led the study’s international team, which included scientists from …

… clearly. The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … hundreds of microalgae are able to partner to form lichens. Studying the symbiosis by investigating a lichen’s genomes … can rapidly create genetic variation in its progeny. The study’s transcriptomic data also identified many genes …

… A former JGI intern is now applying his internship lessons on presentations to peatlands Travis Lawrence sits in his … slides and anticipating the inevitable questions about the study’s methods and analysis, Lawrence is spending time on …