Search

… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and their hitchhikers. The Science … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… The Science The  Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes … mSystems paper , a team at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … phase classifications can be seen on the tool, mapping out similar regions of tetranucleotide frequency. This …

… stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have … a commonly-used process for studying microbial communities, with results published in the  November 2022 issue … HT-SIP is a capability available to request through  the JGI proposal calls . …

… Genome annotations of two C. citriodora subspecies broaden understanding of the … From the distinct smell of eucalyptus to the flavor of wine, terpenes are ubiquitous. A diverse group of … proposal by the DOE’s Joint BioEnergy Institute (JBEI), the JGI worked on resequencing several eucalypt genomes to …

… of microorganisms live among viruses that infect them. But what trends govern those virus-host interactions? Do … metagenomic sequencing. A team co-led by Mária Džunková, postdoctoral researcher at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… of the genome sequence also provides insights into how the multiple chromosomes of Miscanthus arose by ancient … and insights into the dynamics of gene expression as it grows back vigorously year after year (perenniality). The … Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… Sequence-based studies — from metagenomics to single-cell work — have quickly accelerated understanding of giant … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … way of detecting giant viruses in sequence data is read-mapping: using giant virus reference genomes to search for …

… have discovered that the candidate bioenergy feedstock switchgrass has adapted to expand its habitat range. But at … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered … range, but at what cost? In the following guest piece, postdoctoral researcher Joseph Napier from the Juenger lab …

… for receiving and processing user samples. His R&D work focuses on the development of new applications utilizing a variety of technologies to improve the JGI’s capabilities in the areas of metagenomics, …

… role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user … implementation of advanced analysis pipelines and tools as well as development and implementation of microservices in …

… to Susannah Tringe , one of eight scientists and engineers who received the 2020 Ernest Orlando Lawrence Award , one of … Environmental Genomics and Systems Biology Division, and JGI’s deputy for user programs. She also leads the JGI’s Microbial Systems group. The award ceremony was held …

… TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …