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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer … workshops, data carpentry hackathons, and also made new friends while working on their summer projects. Watch … work at the recent JGI Annual Meeting. Through the DOE RENEW initiative, three of the interns – graduate students …
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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A Complex Confection Decoded: Sugarcane Reference Genome
… most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … by an international consortium. With the genetic code of sugarcane, researchers were able to map the location of genes that provide resistance to the brown rust disease …
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … where rain or snow drain into such bodies of water before heading out to bays and oceans. While river microbes are …
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Draft Genome Sequence of Methylocapsa palsarum NE2T, an Obligate Methanotroph from Subarctic Soil
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Products
… Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of the product and deliverables as well as target cycle … assembled to less than 5kb in length, cloned into vector of choice Glycerol stock of sequence verified clone 102/NA …
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Extracting the Secrets of Secondary Metabolites
… survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and … cannot be activated in lab environments. CRAGE made some headway in overcoming this obstacle when it hit the scene in … luminescens and its secondary metabolites work could yield new tools for pest control. Secondary metabolites are highly …
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SPRUCE-ing Up Science
… his backyard in Tennessee — the birds are chirping and a soft breeze ripples through the trees in his backyard. … despite global warming.  At ORNL, Lawrence brings a bioinformatics expertise, a combination of biology and computer … mediate Sphagnum peatmoss resilience to warming . New Phytol. 2022 Jun;234(6):2111-2125. doi: …
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Crysten Blaby-Haas
… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership … knowledge-based user facility at Berkeley Lab. She is spearheading the development of a joint user capability between the JGI and Molecular … PhD, Microbiology and Cell Science, University of Florida NIH Postdoctoral Researcher, UCLA …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… FY2024 EMSL-JGI FICUS collaborative proposal call . Letters of Intent for the joint call are due March 7, 2024. The FICUS call allows researchers to combine the power of genomics and molecular characterization from the JGI and … researchers can also request access to the capabilities of the Biological Small-Angle Neutron Scattering (BioSANS) …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Biotechnology! Loretta Spencer served as a manyterm mayor of Huntsville, Alabama and is known for her contributions to rapidly growing the economy of Rocket City. Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library Construction group for the JGI Plant …
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