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The widespread IS200/605 transposon family encodes diverse programmable RNA-guided endonucleases
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I-Min (Amy) Chen
… research has been focused on semantic and object-oriented data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol Model (OPM) data management tools for scientific … currently the Microbiome Computational Resource Lead at the JGI, responsible for the data management infrastructure of …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made … Pacific Subtropical Gyre, microbes tend to stay localized at different depths. But SAR324 can be found throughout the … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a … role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon cycling and …
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Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens
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Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw
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Toward an Online Repository of Standard Operating Procedures (SOPs) for (Meta)genomic Annotation
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Purifying the Impure: Sequencing Metagenomes and Metatranscriptomes from Complex Animal-associated Samples
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Phage–bacteria relationships and CRISPR elements revealed by a metagenomic survey of the rumen microbiome
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High-resolution metagenomics targets specific functional types in complex microbial communities
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Nontargeted virus sequence discovery pipeline and virus clustering for metagenomic data
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Combining Hadoop with MPI to Solve Metagenomics Problems that are both Data- and Compute-intensive
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