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Refining the Process of Identifying Algae Biotechnology Candidates
… [subhed -- copy to summary above^ as well ] The Science The recipe for growing algae as a source of sustainable biofuels seems … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Microbial Genomics & Metagenomics (MGM) Workshop
Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics … Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
Lake Mendota sits right next to the University of Wisconsin, … McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the freshwater … to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the …
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Toward More Efficient Artificial Photosynthesis
Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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SPRUCE-ing Up Science
A former JGI intern is now applying his internship lessons on … Institute for Biotechnology, and Duke University, published their research related to how bacteria that colonize the …
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Zhong Wang
Research in the Analysis R&D group focuses on developing new bioinformatics solutions to support JGI in adopting new genomics … computational technologies (NanoPore, GPU, Cloud etc) and their applications in solving DOE’s most challenging …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
Back in 2011, JGI-supported researchers published a paper in the … genes. The data from that study is now used across California State University campuses for biotechnology education …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running smaller assemblies — so we head there for a sense of what this supercomputing looks like. …
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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. The Science … by a growing human population and increasing demand for agricultural products.  Sorghum bicolor (L.) Moench is … Half a billion people consider sorghum a staple food in their diet, and the Department of Energy (DOE) also …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with … occupy more space on Earth than any other ecosystem. Therefore, understanding the microbial activity that dominates … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published …
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of … regulation is critical to ensuring genes vital for growth and survival across various environments are …
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated … microbes, and then efficiently retrieve and characterize their genomes. The Impact Despite great strides in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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