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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
… HudsonAlpha Institute for Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of Energy Joint Genome Institute, and facilitates accurate and …
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Crysten Blaby-Haas
… to include in vitro protein-based techniques, algae, and plants, while focusing on understanding the evolution and … (2015) where she co-founded and led the Quantitative Plant Science Initiative (2017-2022), a BER Science Focus … Stübe R, Argüello JM and Merchant SS. (2014) Evolution of a plant- specific copper chaperone family for chloroplast …
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A Step Toward Controlling Soybean Rust
… soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome sequence in … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User … genomics in support of DOE missions related to clean energy generation and environmental characterization and …
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JGI-TMF Critical Minerals and Materials Call
… will be provided for free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user …
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2024 Progress Report
… a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced … Perspective Over the last year, the U.S. Department of Energy Joint Genome Institute has continued its journey to … biological and biochemical functions to meet climate and energy goals, improve food security and sustainability, …
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Introducing New Members of the JGI User Executive Committee
… cellular phenotypes and genotypes. Pawlowska, who studies fungal-bacterial symbiotic systems, noted that she would … shaping the assembly of fungal endophytes across land plants and lichens, mentioned her interest in guiding JGI … and the organization of the JGI Annual Genomics of Energy & Meeting. Any investigator who has been an active …
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Introducing New Members of the JGI User Executive Committee
… collaborators and other scientific organizations. Fungal biologist Stajich from UC Riverside sees the JGI’s … and the organization of the JGI Annual Genomics of Energy & Meeting. Any investigator who has been an active …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… metagenomic sequencing conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User … a complex pattern of evolution for genes related to eating plant compounds in both the oceanic and hot spring  … bacteria lack complete biochemical pathways to break down plant material on their own, they likely cooperate with …
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Tanja Woyke Elected to American Academy of Microbiology
… our resources and help them to push the boundaries of energy and environmental genomics.” Along with Woyke, two JGI users were also elected to the AAM: fungal researcher Jason Stajich of the University of … Larrondo, who spoke at the JGI’s 14th Annual Genomics of Energy & Environment Meeting, as well as Mircea Podar of Oak …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More recently, these long-reads … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User … genomics in support of DOE missions related to clean energy generation and environmental characterization and …
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The fungus that made itself at home
… to its aggressive capacity to damage the wood in homes, bioenergy researchers have been interested in harnessing the brown rot Serpula lacrymans towards breaking down plant mass for conversion to sustainable, alternative … and var. shastensis from North America – against a third fungal Serpula species, S. himantioides from Europe, that …
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Forming Scientific Connections and Building Community
… their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of … learned so much in terms of scientific approach and as a plant biologist, I have learned so many techniques and … Sajeet Haridas & Asaf Salamov Project: “ Improving the JGI fungal mitochondrial annotation pipeline ” Anna Kucherova : …
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