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Learning to Look
… answer the question, “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters … Simon Roux, a JGI research scientist in the  Environmental Genomics group . Training the Search Tool Inoviruses are stealth agents that can enter and exit through the cell membrane without lysing the bacterial host. They can …
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JGI & KBase at PAG XXVII
… collaborative science opportunities. Learn how to apply for a project with the JGI Community Science Program, and … how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks … biology. Researchers who are applying genomic sequence information to BER-funded activities of plant systems that …
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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How Maize Makes An Antibiotic Cocktail
… revealed that just a handful of enzymes are needed to transform zealexins and related precursors into a bonanza of … Science Program . And the work is part of a  larger CSP Functional Genomics proposal to understand terpene  synthesis and … grants from the USDA NIFA AFRI (1758976 to A.H. and E.S.) for sesquiterpenoids, National Science Foundation …
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Cultivating Symbiotic Antarctic Microbes
… of an obligate symbiont—entirely dependent on the other for required nutrients—is genome size. The obligate … growth because they had larger genome sizes and their cells were not observed to associate with host cells. In the  Proceedings of the National Academy of …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… FICUS collaborative proposal call . Letters of Intent for the joint call are due March 7, 2024. The FICUS call allows researchers to combine the power of genomics and molecular characterization from the JGI and … Neutron Scattering (BioSANS) instrument at the Center for Structural Molecular Biology (CSMB) at Oak Ridge …
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User Support Analysis Group
… User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of …
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A Model System for Perennial Grasses
… U.S. Department of Energy (DOE) supports research programs for developing methods for converting plant biomass into sustainable fuels for cars and jets. By studying a close relative model … Johnson Wildflower Center provided support and field sites for experiments. This work was funded by NSF/IOS-1402393 …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… For the first time, a team has comprehensively described … kill outright, replicating so thoroughly that they lyse the cell — a process called lytic infection. But some viruses … virus in 34 hosts or 26 percent of the single cells. Metagenomics sequencing then allowed the team to ask, for the 34 …
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Approved Proposals
… pdf of accepted proposals from previous fiscal years for our Community Science Program (CSP) as well as the Facilities Integrating Collaborations for User Science (FICUS) program.  …
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Four Draft Single-Cell Genome Sequences of Novel, Nearly Identical Kiritimatiellaeota Strains Isolated from the Continental Deep Subsurface
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Comparative transcriptomics of CAZy enzymes in white- and brown-rot agaricomycetes: Evolutionary insights into lignocellulose degradation and the relevance of GH16 glycoside hydrolase functional divergence
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