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Marine Microbe Contains Multitudes
… help regulate the global carbon cycle — fixing, transforming, and respiring carbon. Understanding the metabolisms that SAR324 and other microbes use could inform scientists’ understanding of carbon fluxes in the … Ocean Processes and Ecology and the Daniel K. Inouye Center for Microbial Oceanography: Research and Education. …
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2025 Progress Report
… demonstrate how their laboratory and data science efforts support users, advance foundational science and enable …
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UC Merced Interns Reflect on Their JGI Summer Projects
… language processing techniques to categorize genetic information. Learn more about their work here in a series of … virtual events and technology enabled a fruitful experience for mentors and students alike. Tools like Slack, Google … career in genomics, and to help foster a diverse future workforce in science. Since the program’s inception, more than …
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Virus-Microbe Interactions of Mud Island Mangroves
… the SCGSR research experience was “an ideal opportunity for me to get real-world experience.” As he finalizes his … as a computational biologist. My primary future goal is to form a startup.” …
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Supporting Global Research into Actinomycetes
… The 500 species described within the group are responsible for roughly two-thirds of antibiotics, and a deeper … key to discovering new antiviral medicines and treatments for infectious disease. Streptomycetes are also abundant in … It is the largest genus within Actinobacteria and therefore a cornerstone of ActinoBase,  a public platform built …
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A More Intuitive Phytozome Interface
… of 250 plant genomes and has been under active development for over 5 years, provides users with the genome browsers, … attempted to make sure users will continue to have straightforward access to all the data in Phytozome v12, and that … bookmarked v12 links (e.g., to gene reports and organism information pages) will be seamlessly forwarded to Phytozome …
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JGI Early Career Researchers Featured in mSystems Special Issue
… sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … paper, uncovering giant virus sequences in soil for the first time. A second approach known as DNA stable … Eloe-Fadrosh’s Environmental Genomics group, makes a pitch for readers to get involved in the developing field of virus …
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From Competition to Cooperation
… to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently evolved to establish … Summary There are three types of fungal saprotrophs in the forest. White rot can break down the cellulose, … Genomics Initiative (CSP # 305), Metatranscriptomics of Forest Soil Ecosystems project (CSP # 570) and the 1000 …
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A Plant Root Atlas for Tracking Developmental Trajectories
… nearly 100,000 single root cells and combining the information with previously published datasets. The work was  … of single-cell datasets in plants and provides a foundation for still larger efforts in diverse plant species beyond models,” he said. Cole … address some of the most pressing challenges of our time. For more information, please visit  …
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Doubling Down on Known Protein Families
… unique makeup of microbe players and the functions they perform, artificially replicating a whole community is … each individual microbial species within a community. Therefore, the process hinges on referencing to existing genome … were typically discarded from any analysis as useless information. These represent the ‘unknown unknowns’ because …
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Fishing for Novel Cellulose Degraders
… The Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. Designed with feathers … microbes. The new technique is another tool for microbial ecologists to learn more about the diversity … approach on bacterial laboratory models to set a reference for its performance, and then applied it to environmental …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  … State University, which archives and makes available for research over 100,000 samples and specimens of over 60 … co-hosted by the JGI and EMSL inviting researchers to apply for a FICUS proposal. Additionally, researchers may also …
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