Results

Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Clum, A. et al. (2021)  DOE JGI metagenome workflow …
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Genome‐wide association studies and expression‐based quantitative trait loci analyses reveal roles of HCT2 in caffeoylquinic acid biosynthesis and its regulation by defense‐responsive transcription factors in Populus
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
For the first time in several years, the DOE Joint Genome Institute hosted several UC Merced students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with … determination as they came onsite. From data carpentry to science communications, their schedules were filled with …
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Genome sequencing of Rigidoporus microporus provides insights on genes important for wood decay, latex tolerance and interspecific fungal interactions
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Virulence of banana wilt-causing fungal pathogen Fusarium oxysporum tropical race 4 is mediated by nitric oxide biosynthesis and accessory genes
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Predicting the chemical space of fungal polyketides by phylogeny-based bioinformatics analysis of polyketide synthase-nonribosomal peptide synthetase and its modification enzymes
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Eelgrass Proves to Be Much Younger Than We Thought
… about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley …
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Trent Northen
… in 2008, Dr. Northen has had leadership roles within large DOE-funded research programs using mass spectrometry for … the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic … ecosystems (EcoFABs). … Trent Northen is the Metabolomics Science Program Head at the JGI. Click to learn more about …
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Genome and Transcriptome of Clostridium phytofermentans, Catalyst for the Direct Conversion of Plant Feedstocks to Fuels
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Novel and Emerging Capabilities that Can Provide a Holistic Understanding of the Plant Root Microbiome
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Interactions between plants and soil shaping the root microbiome under abiotic stress
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Host genotype and age shape the leaf and root microbiomes of a wild perennial plant
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