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… an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered … is part of the JGI Genome R&D Group and is one of more than 100 scientists and systems engineers involved in … chromosomal sequences in mixed-genome samples) with a new tool called MetaGNN (Prashant Pandey of CRD). The …

… research activity is focused on developing and implementing new technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … 2022 Jun 17;13(1):3502. Udwary DW, Otani H, Mouncey NJ. New keys to unlock the treasure trove of microbial natural …

… that helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ … to Land: Plant Evolution to Change’ (SPP 2237), and grant 410739858 in the frame of the project CharMod to K.v.S., as … further supported by Austrian Science Fund (FWF) project 10.55776/P34181 to A.H. The work (proposal: …

… J (Senior Editor 2016-2021), Peer J (2015-2019), Scientific Data (2017-2019). Reviewer for major journals and funding … lineages in the dark ocean. Science 333, 1296-1300. Newton et al. 2007. The Calyptogena magnifica … chemoautotrophic symbiont genome. Science 315, 998-1000. Woyke et al. 2006. Symbiosis insights through …

… genes involved in agronomic traits related to nutritional quality and disease resistance  due to the sequence’s availability via Phytozome. In 2015,  a new and revised version brought the soybean sequence up to … and that’s going really well. And having the sequence data available for us to enable that research will have a …

… Sphagnome data would enable researchers’ insights on their potential … up nearly 3 percent of the earth’s land surface. In the New Phytologist, researchers led by David Weston of Oak … Through the CSP, researchers are aiming to have two high quality reference genomes for peat-forming species that …

… A new approach for improving functional annotation in fungal … closest relative S. paradoxus at high temperatures (39°C/102°F). The Impact One of the challenges in understanding … and improve functional annotation to harness the genomic data. Reported October 8, 2018, in Nature Genetics , a team …

… early stages, so I can begin biological analysis of the data sooner than I anticipated.” In her message, Dumont … part of UC Merced’s history and already in its five years has made a really strong impact,” she said. “I look … the initiation of the Venomous Host-Microbe Consortium. Data produced during Ul-Hasan’s JGI internship led to her …

… (in this case, a plant’s complete genetic makeup) and 10 common gardens. We discovered that 8X populations have … production. Building on the framework provided by our new switchgrass manuscript , we plan to use existing data as well as generating additional genomic resources to …

…   For years, researchers have known that many datasets miss a key part of microbial genomes: the mobile … can move between organisms. But now, deep sequencing and new analysis methods are bringing this mobilome into light, …