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Tracking the Origins of Methane-Producing Microbes
… the total global methane production. They are thought to use billions of tons of the carbon dioxide trapped in … on the global carbon cycle. All methanogenic archaea use one of three pathways for methanogenesis: … (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the discovery of a novel archaeum from …
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Daniel Udwary
Secondary Metabolites group. His research interests lie in use and development of bioinformatics tools for elucidation …
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A Complex Confection Decoded: Sugarcane Reference Genome
… foundational genetic information that crop breeders can use to improve sugarcane varieties and advance a sustainable … genome was more challenging and took more than a decade because there were pieces from multiple boxes, including some … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… and what escapes to the atmosphere in the form of greenhouse gases (e.g., carbon dioxide, methane, and nitrous … particularly important for characterizing fungal genes, because, unlike bacteria, they often carry interrupting … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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New Research Sheds Light on Diversity in the Deep Sea
… openings in the Earth’s crust that emit hot, mineral-rich water. These vents are too deep in the sea to get any … to living in extreme conditions. At these vents, and underwater volcanoes,  researchers studied microbial communities … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
Studying the  genomes of microorganisms is incredibly useful for understanding the microbiome of the earth, but … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Working together, they found most bacterial genomes from water and soil communities were at least 80% complete when …
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A Collaboration to Improve Plant Genome Annotations Across Species
… of Energy (DOE) Joint Genome Institute (JGI)*, a national user facility located at Lawrence Berkeley National … keep updating the Gene Atlas with curated datasets from CSP projects and aim to improve plant gene function … source at the metabolic level. Sarah:  Can just anyone use Plant Gene Atlas, or do you have to be a subscriber? …
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JGI on the 2021 Highly Cited Researchers List
… with switchgrass biology. The information could be useful toward the DOE’s interest in harnessing the crop … stations across 60 global cities. He and his colleagues used an extensive JGI database to investigate viruses … a JGI Engagement Webinar on How to Successfully Apply for a CSP Proposal. She also co-organized the NeLLi 2021 …
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A Step Toward Controlling Soybean Rust
… is the world’s leading soybean producer , and soybeans are used to produce biodiesel. The fungus  Phakopsora pachyrhizi causes Asian Soybean Rust (ASR) and is the major pathogen of … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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How Microbes Can Protect Plants in Drier Straits
… approved through the JGI Community Science Program, to use microbiome science to help make plants more resilient to …
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Spreading of Aqueous Solutions of Trisiloxanes and Conventional Surfactants over PTFE AF Coated Silicone Wafers
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Introducing New Members of the JGI User Executive Committee
The JGI welcomes three new members to the JGI User Executive Committee (UEC) : Roland Hatzenpichler of … of the University of Arizona! They join nine other JGI users already serving on the UEC – go here to view the full … archaea, expressed his interest in giving a voice to JGI users who feel that certain data sharing policies fail to …
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