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Increasing the Thermodynamic Driving Force of the Phosphofructokinase Reaction in Clostridium thermocellum
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DOE JGI Interns Share Their Summer Experiences
… Many of them spent the summer crunching genomic data at a computer; a few had the opportunity to spend time … analyses at their desks. As part of the DOE JGI’s efforts to promote diversity and inclusion in the sciences, … Cristhian Gutierrez and Bryan Rangel Alvarez are both  California Alliance for Minority Participation (CAMP) students …
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2025 Progress Report
… JGI researchers demonstrate how their laboratory and data science efforts support users, advance foundational science and enable … advanced genomic capabilities, large-scale AI-ready data and professional expertise to support the global …
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Neha Varghese
… Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for … through implementation of advanced analysis pipelines and tools as well as development and implementation of …
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A Community Resource for Secondary Metabolite Researchers
… compounds shared by most living creatures for energy, growth and reproduction—most organisms produce a … gene clusters (BGCs.) As reported in the recent Database issue of the journal Nucleic Acids Research , … using multiple commonly used sequence analysis tools is a means of expediting BGC and biosynthesis …
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Four amino acids define the CO2 binding pocket of enoyl-CoA carboxylases/reductases
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Genome-wide prediction and transcriptome analysis of sugar transporters in four ascomycete fungi
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Graduate Students Get Thesis Research Opportunity at the JGI
… to answer our most pressing problems. I’m very much looking forward to working with JGI and LBNL scientists and have … of Texas-Austin. Rambo will be studying the influence of viruses on carbon cycling in coastal mangroves. The work … to work with JGI virus researchers and harness the IMG/VR database. “The SCGSR award will further my goal of resolving …
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JGI User Executive Committee Expands
… Laboratory (Berkeley Lab). They are: Ivan Baxter of the Danforth Center, Sundy Maurice of the University of Oslo, Aaron … more plant proposals and provide feedback on pangenome tool development. Maurice is a fungal evolutionary ecologist … or improving bioinformatics tools that can help with dataset analysis, as well as how they can be shared with and …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… from this biomanufacturing collaboration is available for licensing. The Science In  Nature Communications , … biotechnology applications of various biomaterials. These efforts align with BER missions to provide the fundamental … in the real world. They estimated that a kilogram of high quality HAp from osteoyeasts would cost $19 to make, and it …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a … to spread across most of the plant’s ecosystems. The Impact For decades, the liverwort  M. polymorpha has been used as a … Program . The comparative framework provided by these high quality reference genome sequences could help researchers …
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Charting Progress toward Professional Goals
… next generation of STEM professionals. Students can apply for internships and work onsite with an experienced … to projects that will help them build skills and tools, they gain invaluable scientific and technical experiences.  Genomic data scientist Deanna Beatty sat down with interns hosted at …
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