Results

Integration of Metagenomic and Stable Carbon Isotope Evidence Reveals the Extent and Mechanisms of Carbon Dioxide Fixation in High-Temperature Microbial Communities
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Phylogenetic and Functional Analysis of Metagenome Sequence from High-Temperature Archaeal Habitats Demonstrate Linkages between Metabolic Potential and Geochemistry
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Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute … areas. Additional duties of this Deputy include interacting with users seeking to exploit new genomic technologies and … 2021-  NLM Board of Regents Working Group on “NIH Comparative …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer … beyond the tried-and-true method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell … stable isotope probing (DNA SIP) relies on incubating DNA with isotopically-labeled compounds to link active microbes …
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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High-Quality Draft Genome Sequences of the Uncultured Delta3 Endosymbiont (Deltaproteobacteria) Assembled from Metagenomes of the Gutless Marine Worm Olavius algarvensis
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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Metagenomic and Metatranscriptomic Analyses Reveal the Structure and Dynamics of a Dechlorinating Community Containing Dehalococcoides mccartyi and Corrinoid-Providing Microorganisms under Cobalamin-Limited Conditions
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship … and University of California (UC), Merced. What started with 2 interns in the summer of 2014 has grown to a total of … has started a new position as the Senior Manager, Machine Learning at Pilot Flying J. Nathaniel Brown was a 2022 …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… from the full announcement “ Berkeley Lab Receives Multiple 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences … multi-terabyte datasets assembled for the first time with  MetaHipMer , taking advantage of scalable parallel …
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