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… has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology Pathway Engineering group. His research focus includes engineering of non-model yeasts for production … developing genome engineering tools for non-model organisms, modulating microbe-microbe and plant-microbe …

… have successfully automated aspects of a commonly-used process for studying microbial communities, with … process — as well as a key way scientists study microorganisms. Because microorganisms live in complex … HT-SIP is a capability available to request through  the JGI proposal calls . …

… This webinar focused on how the JGI employs single-molecule, long-read DNA sequences to aid … requires ~ 1.5-10 ㎍. Low-input protocols are continuously improved, but currently require input in the ~ 30 – … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …

… genomics can add significant value to the other commonly used culture-independent sequencing approaches including … the planet’s nutrient cycles and are potentially of use in fields ranging from agriculture to biotechnology and … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… a family of compounds that protects it against infections — using surprisingly few enzymes. The Science Maize ( Zea mays … genes encoding these enzymes to another plant, such as  Sorghum bicolor — a  candidate bioenergy feedstock and  JGI Flagship Plant — could produce at least 15 zealexins. …

… first time, a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But what … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do anything, they must find a … bacteria, millions of  microbes govern ecosystems. These organisms carry out important environmental processes like  …

… summarizing the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen Nayfach and  Nikos … have been forced to confront the awesome power that viruses have to affect nearly every aspect of our daily lives.  But for researchers who study viruses that infect organisms much smaller than humans, like bacteria, this …

… these bacteria evolved could help inform engineering microorganisms for biofuel production and other sustainable applications. Summary Hot springs are … A recent study published in  The ISME Journal     focused on a class within  Chloroflexota called  … (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the …

… vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. These vents are too … sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. At these … the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …

… boggy wetlands produces an estimated 5% of annual greenhouse gas emissions. Understanding how sphagnum, a primary … their role as carbon sources. Summary Sphagnum, a genus of just under 400 mosses that can carry up to 25 times their dry … no. 10.46936/10.25585/60001030) (A.J.S.) conducted by the US Department of Energy (DOE) Joint Genome Institute ( …