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Metagenomic Sequencing of Two Salton Sea Microbiomes
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Genome sequence of Streptomyces auratus DSM 41897
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Genome sequence of Streptomyces sp. DSM 42143
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… Mouncey. Using CRAGE, JGI has established a portfolio of microbial hosts that users can select to be engineered. … domesticate some 60 strains, inserting into them a genetic sequence that acts as a “landing pad.” Mouncey adds, “Once … to inform the engineering of stable, synthetic microbial communities to take advantage of their joint metabolisms. …
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An Integrated Dataset to Understand Ecosystem Interaction
… yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand … molecules produced by the trees and associated microbial communities. This revealed key metabolic pathways and …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… Newly developed chemiluminescent biosensors shed light on how bacteria function and … functions. It plays an important role in regulating microbial cellulose production and biofilm formation, which … Ec YcgR, within the Nano-lantern scaffold. They then mined sequence databases for homologous YcgR proteins and chose a …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a … relationships outside of the root cells) lineages. To learn why, researchers analyzed 135 fungal genomes representing …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at … and the  oilseed crop false flax – genomes that have been sequenced by the JGI – and the common strawberry, which is … Binghamton “studying polyploids and transposon evolution, expanding on this kind of analysis in more species, as well …
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Cultivating Symbiotic Antarctic Microbes
… cycle. The JGI is sequencing large numbers of microbes and microbial communities that contribute to carbon cycling, and is … in understanding the genomic basis and ecological consequences of microbe-microbe interactions. Using metagenomes … 4031). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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Data Policy & Support
… Read our research integrity and data code of conduct. …
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Microbial metagenomes and metatranscriptomes during a coastal phytoplankton bloom
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On Single-Cell Enzyme Assays in Marine Microbial Ecology and Biogeochemistry
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