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Metatranscriptomes of California grassland soil microbial communities in response to rewetting.
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A metagenome-level analysis of a microbial community fermenting ultra-filtered milk permeate
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Crysten Blaby-Haas
… Molecular Foundry, a nanoscale research and knowledge-based user facility at Berkeley Lab. She is spearheading the … engineering. She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… MycoCosm — a platform widely used across the research community — the work lowers technical barriers for … (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Berkeley Lab, addressed this gap in a … genome assemblies in the National Center for Biotechnology Information's GenBank. This led to identifying 6,467 of …
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Scaling Up Existing Skill Sets
… six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 … Mentors: Igor Grigoriev and Asaf Salamov, Fungal and Algal Program What effect has your summer internship with the JGI …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… our collaborations and capabilities to enable great science that will help solve energy and environmental … portal Phytozome. The combination of field data and genetic information has allowed the research team to associate … Just as the common gardens have flourished, so has the community of switchgrass researchers grown. After almost two …
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Offerings & Capabilities
… of the JGI’s Genomic Technologies department is   ensuring users have access to cutting-edge capabilities to help advance their science by generating data in three overarching categories: …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … senior author  Tanja Woyke , who heads JGI’s  Microbial Program . The team mined more than 8,500 publicly available … from several DOE-mission relevant proposals through JGI’s  Community Science Program . Proposals from researchers at …
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Peatland microbial community responses to plant functional group and drought are depth‐dependent
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Impacts of The Wetland Sedge Carex aquatilis on Microbial Community and Methane Metabolisms
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Long-read metagenomics of soil communities reveals phylum-specific secondary metabolite dynamics
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Microbial communities of the Laurentian Great Lakes reflect connectivity and local biogeochemistry
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