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Honey Bee Gut Microbiota Divvy Up Dinner
… what biochemical processes? Now, an international team of researchers has identified the major metabolic roles of … shared between honey bee and bumblebee gut microbiomes. Researchers found that pollen’s pectin and hemicellulose are … including collecting and analyzing the honey bee gut metagenome, which was done with the help of the US Department …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… trichocarpa,  or the poplar tree, are potential biofuel feedstocks of interest to the U.S. Department of Energy … (DOE). (Poplar is a Flagship Plant.) To engineer them, researchers need to select and breed cultivars for the next … some songbird W chromosomes — suggest that they are advantageous enough to have evolved multiple times independently. …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… the complex organic matrix of the forest floor, a team of researchers have found that there is a striking division of … to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … National Laboratory, to create the database. JGI provided metagenome and metatranscriptome sequences, as well as …
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JGI Accepts 17 Proposals for Community Science Program
… group of fast-growing tree species that are widely grown as feedstocks for lignocellulosic and other biorefinery … wildfire.  Eight of the approved proposals are led by researchers, including Nelson and Roth, who have not been a … Ederson Jesus of Embrapa, Brazil’s public agricultural research corporation, is focused on microbial interactions …
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Alabama A&M Interns Access An Abundance of Knowledge
… an internship program to bring students to the JGI for research training experience. Enabled by the DOE RENEW … Dent worked with JGI mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant …
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Tanja Woyke Elected to American Academy of Microbiology
… was among the Lab’s 2015 Women @ the Lab honorees. Woyke’s research focuses on developing and harnessing single-cell … Woyke, two JGI users were also elected to the AAM: fungal researcher Jason Stajich of the University of California, Riverside, and virus ecology researcher Matt Sullivan of The Ohio State University. Luis …
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Igor Grigoriev
… and PhycoCosm portal. Dr. Grigoriev engaged thousands of researchers in genome projects and organized numerous … Physics Institute, Moscow, Russia PhD in Molecular Biology, Research Institute for Genetics and Selection of Industrial … 2008; 452: 88-92. … Clarivate/Thomson Reuters Highly Cited Researcher/The World’s Most Influential Scientific Minds, …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets … species actively munch on a specific chemical compound. By feeding a microbial community a modified version of a … easier to compare?” said Malmstrom, who worked with JGI Metagenome Program head Emiley Eloe-Fadrosh to host …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… early collaborations that could help crop breeders and researchers predict how crops and model organisms may … he can use what they’ve developed here to further future research and answer complex questions. …
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Eelgrass Proves to Be Much Younger Than We Thought
… eelgrass adapted and evolved throughout its history. Their research, published in  August 2023 in  Nature Plants , was … and Portugal. In order to develop a timeline like this, researchers would normally craft a genetic clock based on … another. This change occurs at a predictable rate, enabling researchers to use the genome assembly to calibrate their …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and …
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Accelerating Metagenomics Discoveries with Deep Learning
… in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data … assemble and interpret. The workshop aimed to showcase how researchers are utilizing deep learning to automatically … the JGI. Sevim’s work is part of an ongoing effort to build greater collaboration between JGI and scientists in the …
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