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Taking Stock of the Known and Unknown Microbial Space
… diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial genomes becoming available to … of the available datasets. Efforts to recover MAGs by extracting data directly from environmental samples over …
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Finding the Fermenters
Harnessing BER-funded data resources, researchers built an … prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in environments with … community brings together the data resources enabled by the DOE Biological and Environmental Research (BER) …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is … internship in 2018. She selected one of the projects posted by JGI fungal researchers, Igor Grigoriev and Asaf Salamov, …
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Fishing for Novel Cellulose Degraders
A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of the most vital pieces … specific catches. A similar technique has been developed by researchers led by Tanja Woyke at the U.S. Department of … roles in their community. This study shows how the function-driven, single-cell screen can uncover more about …
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UC Merced Interns Reflect on Their JGI Summer Projects
… with JGI scientists on research projects that contribute to the larger mission of the U.S. Department of Energy. … develop presentation skills as well as build their network in the field of genomics and scientific research. The topics … more about their work here in a series of videos produced by JGI Communications & Outreach intern Ashleigh Papp. The …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science … harnessing algae for bioenergy and the greater bioeconomy. By bringing together publicly available genomic data on …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science … harnessing algae for bioenergy and the greater bioeconomy. By bringing together publicly available genomic data on …
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in … discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on …
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system focused on …
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Green Algae Reveal One mRNA Encodes Many Proteins
Gene expression in eukaryotes was long held to be monocistronic – that is, a … species of algae and kept seeing what looked like mistakes by the gene prediction algorithms. I decided to dig in a …
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An Automated Tool for Assessing Virus Data Quality
… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, … have now developed CheckV (pronounced “Check-Vee”) to help researchers assess and improve the quality of … as carbon, nitrogen and sulfur are themselves regulated by viruses in their environments. Environmental DNA …
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Graduate Students Get Thesis Research Opportunity at the JGI
… (SCGSR) program awards graduate students the opportunity to pursue part of their thesis research at one of the DOE … Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of Mark Sistrom’s lab at … and I hope that this open-source platform will be utilized by researchers from a variety of disciplines who seek to …
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